Thanks Peter, true I did not realize that ercc_contigs is empty, but I am not
sure how to "populate" the dictionary if I only have one column for the value
but no key
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I have the following script which does not return anything, no apparent mistake
but my output file is empty.I am just trying to extract some decimal number
from a file according to their names which are in another file. from
collections import defaultdict import numpy as np
[code]ercc_contigs=
@alex23 I can't thank you enough this really helped me so much, not only fixing
my issue but also understanding where was my original error
Thanks a lot
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I have two text file with a bunch of transcript name and their corresponding
length, it looks like this:
ERCC.txt
ERCC-2 1061
ERCC-3 1023
ERCC-4 523
ERCC-9 984
ERCC-00012 994
ERCC-00013 808
ERCC-00014 1957
ERCC-00016 844
ERCC-00017 1136