[PyMOL] Beginning with PyMol

2015-04-19 Thread bkpsusmitaa
Dear Sir / Madam, My daughter and I are novices in PyMol. We have only just begun! :) I have seen the page http://www.pymolwiki.org/index.php/Practical_Pymol_for_Beginners. Begins with a protein molecule. We use the PyMol package from the Debian Repository in a Knoppix system. How can we begin by b

[PyMOL] Is Ball & Stick models of molecules possible?

2015-04-22 Thread bkpsusmitaa
Hi! So far we have been able to make only stick models for molecules. We now wish to build both solid (based on electronic clouds) and Ball & stick models. Can we have several molecules of identical types to build crystal structures, amorphous structures or fluide models, as the cases could be f

Re: [PyMOL] Is Ball & Stick models of molecules possible?

2015-04-23 Thread bkpsusmitaa
Corrigendum: Are instead of Is in the title/header. as the cases could be(to add a comma) Apologies for the typos. Regards, Rajib -- BPM Camp - Free Virtual Workshop May 6th at 10am PDT/1PM EDT Develop your own process in

Re: [PyMOL] Is Ball & Stick models of molecules possible?

2015-04-28 Thread bkpsusmitaa
Yes, now know how to build surface. But it appears that there is very little activity on the forum. Anyway, thanks. Regards On 23/04/2015, bkpsusmitaa wrote: > Corrigendum: Are instead of Is in the title/header. > as the cases could be(to add a comma) > Apologies for the typos.

[PyMOL] Is cyclododecene in the database of PyMol?

2015-04-28 Thread bkpsusmitaa
Hello, Dr. Thomas and members, Is cyclododecene in the database of PyMol? How to search for a molecule in Pymol database? How to confirm that any particular we have built is feasible? Eager to hear, Regards Rajib & Yuktimmana

Re: [PyMOL] Is cyclododecene in the database of PyMol?

2015-05-07 Thread bkpsusmitaa
We have searched for cyclododecene and different website has different structure. Which of these is true? Is it possible for it to be analysed by PyMol? Regards, Rajib & Yuktimmana -- One dashboard for servers and applica

Re: [PyMOL] Is cyclododecene in the database of PyMol?

2015-05-07 Thread bkpsusmitaa
Dear Prof. Wassenaar and Prof. Martin, We thank you very much for taking time to send us the information we needed. Regards, Rajib & Yuktimmana -- One dashboard for servers and applications across Physical-Virtual-Cloud W