Hi:
I am trying to use the Alignment Objects (i.e., lines between the paired
aligned atoms) created by using the OBJECT argument of the ALIGN command to
illustrate domain movement between the superimposed ligand-bound and
unbound forms of an enzyme.
I successfully made the basic aligned image,
inst a sequence alignment is always a
> good idea especially for rather unrelated proteins.
> >
> > I do have a script which can accomplish this, it is based on
> “colorbyrmsd.py”. However it is not ready for primetime, but I can share
> this with you if there is interest. Conta
