[PyMOL] Corrupted IDTF file from small molecule (sticks representation)

2014-02-09 Thread Riccardo
n the style is set to cartoon (for proteins, not small molecules), the idtf file is good, but always without any other graphic representation different from the cartoon. Is this a limit for PyMOL idtf exporter, for which an implementation is required? Thanks a lot, Riccardo Volpe *ChemBioScri

Re: [PyMOL] Corrupted IDTF file from small molecule (sticks representation)

2014-02-10 Thread Riccardo
to see if I could figure out how to implement the PyMOL idtf exporter, thanks. A big salute and thank you for the information, Riccardo *ChemBioScripting | X3D PyMOL Molecule Viewer <http://chembioscripting.hol.es> *|* Gioacchino Riccardo Volpe* 2014-02-11 2:54 GMT+01:00 Sampson, Jared

[PyMOL] How to apply "cartoon_side_chain_helper" only to selection

2014-03-20 Thread Riccardo
t;(not residues)", enable=1); # invert "residues" selection cmd.set("cartoon_side_chain_helper", "on"); cmd.unset("cartoon_side_chain_helper","residues"); but in this way I can't see "*cartoon_side_chain_helper

Re: [PyMOL] How to apply "cartoon_side_chain_helper" only to selection

2014-03-20 Thread Riccardo
uot;); cmd.hide("everything","1qpe_copy"); cmd.show_as("cartoon","1qpe"); cmd.show("sticks","/1qpe//A/316+317+319"); cmd.set("cartoon_side_chain_helper", "off", "1qpe"); cmd.show_as("cartoon"

[PyMOL] PyMOL function to export a wrl file

2014-05-12 Thread Riccardo
dules/pymol/api.py -> line 128 c) pymol/modules/pymol/querying.py -> line 631 but, in nobody of those files, I can understand how "get_vrml()" writes and exports the wrl file. Thanks a lot for your explanations. Regards, Riccardo Volpe *ChemBioScripting | X3D PyMOL Molecule View

Re: [PyMOL] PyMOL function to export a wrl file

2014-05-13 Thread Riccardo
Found: line 1143, in "pymol/layer1/ray.c" *ChemBioScripting | X3D PyMOL Molecule Viewer <http://chembioscripting.hol.es> *|* Gioacchino Riccardo Volpe* 2014-05-12 15:17 GMT+02:00 Riccardo : > Hello to the PyMOL mailing list. > > I'm searching for the place w

[PyMOL] Steps to create a movie with objects and cameras moved independently of each other in PyMOL

2018-07-22 Thread Riccardo
proceed for such an animation? Thank you for your help, best regards, Riccardo -- Check out the vibrant tech community on one of the world's most engaging tech sites, Slashdot.org! http://sdm.link/slashdot___

Re: [PyMOL] Steps to create a movie with objects and cameras moved independently of each other in PyMOL

2018-07-23 Thread Riccardo
reinterpolate, object=AA mview reinterpolate, object=BB mplay Cheers [1]: https://pymolwiki.org/index.php/MovieSchool_5 Il sab 21 lug 2018, 02:06 Riccardo ha scritto: > Hello, PyMOL community, > > I have compiled open-source PyMOL v2.2.0a0 under Linux OS. > > Reading