I have been trying to build and install pymol-0.99rc from source because the
binary version will not work on my system (there appears to be an
incompatibility in my recently updated python install and the provided pymol
- rebuilding on my pentiumpro system worked fine). I have managed to get
t
On Wednesday 22 March 2006 09:05 am, Joao Renato Carvalho Muniz wrote:
> Or using Gimp (on Linux and window$).
> Mark A Saper wrote:
> > You can easily change the resolution (dpi) of an image without
> > changing the number of pixels, by editing the file in Photoshop (in
> > Image Size, change res
Is anyone running pymol on an AMD64 system? If so, did you find a prebuilt
binary or did you build it yourself? If you built it yourself...HOW DID YOU
DO IT? I'd greatly appreciate help in this regard.
Thank you,
praedor
--
The Reichstag fire is to Hitler as 9/11 is to Bush
pgpACeS5iFOVQ.
Great! Thank you. I've just finished trying and failing to get pymol to
build again on my AMD64 Mandriva system. It invariably fails quickly with:
layer0/Crystal.c:314:1: error: unterminated argument list invoking macro
"sprintf"
layer0/Crystal.c: In function 'CrystalDump':
layer0/Crystal.c:2
xport the lib path (export or setenv LD_LIBRARY_PATH)
>
> Regards
>
> Andrea
>
> 2006/4/12, Praedor Atrebates :
> > Great! Thank you. I've just finished trying and failing to get pymol to
> > build again on my AMD64 Mandriva system. It invariably fails quick
Would it be possible to add setting to pymol for a default working directory?
Along with this, perhaps a setting that, by default, ignores hidden
directories? As it now stands, whenever I fire up pymol on linux, I have to
navigate down a huge list of hidden directories to find the directory, t
I have produced several threading models of a protein (the app threader 3.5
can output pdb format models) I am studying. The models are OK for the most
part but there are often odd gaps in which the peptide backbone has simply
been "broken" and the ends separated by some distance - but they sho
or useful for
> handling conformational changes when starting from valid 3D geometries.
>
>
> If you are forming bonds or building molecules from scratch, then you'll
> need to use an external tool like OpenEye's Szybki or Schrodinger's
> MacroModel in order to
I would like to make some settings I use permanent and default in pymol
because every time I start pymol or reinitialize and load a new pdb/pse I
have to make a series of changes again in the settings. Is there a file that
pymol uses to set its default settings? What is its name?
I want seque
I needed to have a measurement of the "actual" physical long dimension of a
protein model to compare with x-ray scattering data. I activated the surface
mesh feature and at the extreme ends of the longest axis, right at the
surface boundary, created a carbon atom at each position, then simply u
On Monday 16 July 2007 03:14:32 Martin Höfling wrote:
> Am Freitag, 13. Juli 2007 schrieb Joris Beld:
>
> Gruezi Boris,
>
> > I do not want to start a linux distribution war but we are curious under
> > which distribution pymol is developed/tested and what people generally
> > are using to run pymo
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