[PyMOL] Re: PyMOL-users digest, Vol 1 #2 - 2 msgs

o read out the pymol settings, such as 'bg_color', 'antialias' and any other variables. is there such a pymol function? cheers peter :)______ Peter Haebel Laboratory of Structural Biology, Phone: +64-9-373 7599 ext. 7237 School of

[PyMOL] Generating stereo figures using contrib.stpng()

luded in your python path. cheers peter :) _______ Peter Haebel Institute for Molecular Biology and Biophysics ETH Hoenggerberg, HPK H 11 CH-8037 Zurich Phone: +41 1 63-33960 Fax: +41 1 633-1246 Email: peter.hae...@mol.biol.ethz.ch # Contributed functiona

[PyMOL] access space group and cell dimensions of stored molecules

i have started working on a space group class that can display symmetry operators, etc... and i got stuck trying to obtain the space group information from pymol molecule objects. - how can i get the space group and unit cell dimensions of an object? secondly, i am trying to write a wizard

[PyMOL] Updated OpenGL Hardware Recommendations

? -- ___ Dr. Peter Haebel Philipps-Universität Marburg Institut für Pharmazeutische Chemie Marbacher Weg 6 D-35032 Marburg phone: +49-6421-28-25072 fax: +49-6421-28-28994 email: peter.hae...@staff.uni-marburg.de http://www.agklebe.de

Re: [PyMOL] line width

______ Dr. Peter Haebel Philipps-Universität Marburg Institut für Pharmazeutische Chemie Marbacher Weg 6 D-35032 Marburg phone: +49-6421-28-25072 fax: +49-6421-28-28994 email: peter.hae...@staff.uni-marburg.de http://www.agklebe.de

Re: [PyMOL] Help/suggestions for illustrating lattice arrangement

o.tmpl > ___ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users -- ___ Dr. Peter Haebel Philipps-Universität Marburg Institut für Pharmazeutis

Re: [PyMOL] residue selection in one chain only

yMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users -- ___ Dr. Peter Haebel Philipps-Universität Marburg Institut für Pharmazeutische Chemie Marbacher Weg 6 D-35032 Marburg phone: +49-6421-28-25072 fax: +49-642

[PyMOL] APBS plugin - warnings generating pqr files

molecules! ObjectMapLoadDXFile: Loading from 'pymol-generated.dx'. DXStrToMap: Dimensions: 129 129 97 DXStrToMap: Origin 14.554 -48.010 -7.484 DXStrToMap: Grid0.5790.5230.664 DXStrToMap: 1614177 data points. ObjectMap: Map Read. Range = 3352.843994 to 12333.959961

Re: [PyMOL] under US$500 video card recommendations?

iling list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users -- ___ Dr. Peter Haebel Philipps-Universität Marburg Institut für Pharmazeutische Chemie Marbacher Weg 6 D-35032 Marburg phone: +49-6421-28-25072 fax: +49-6421-28-28994 email: pet

[PyMOL] spectrum by atomic properties

Dear all, i would like to color a molecule according to its partial charge. i used spectrum partial_charge, rainbow, selection=test without any success, although spectrum b, rainbow, selection=test works just fine. are the properties that can be selected limited to b-factor (b) and occupancy

Re: [PyMOL] combining models in a biounit

sers mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users -- ___ Dr. Peter Haebel Philipps-Universität Marburg Institut für Pharmazeutische Chemie Marbacher Weg 6 D-35032 Marburg phone: +49-6421-28-25072 fax: +49-6