[PyMOL] visualizing a transparent surface within a transparent surface

Hello! So, I've had this problem for a while now. I have a ligand that goes deep into a protein. I have the ligand with stick representation. I have the protein in cartoon representation. I have both ligand and protein surfaced with 0.5 transparencies. The ligand surface is yellow and the pro

Re: [PyMOL] visualizing a transparent surface within a transparent surface

in photoshop. > > Is there a way to do what Nasir is asking directly in PyMOL? > > > > > On Feb 16, 2016, at 8:15 AM, Nasir Bashiruddin > wrote: > > > > Hello! > > > > So, I've had this problem for a while now. > > > > I have a ligand that