Re: [PyMOL] Shell utilities for structural bioinformatics

_____ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net > <mailto:PyMOL-users@lists.sourceforge.net>) > Info Page: > https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: >

[PyMOL] Outline width for ray tracing

is. Is is possible to define this, and if so, how? many thanks in advance, Marko -- Marko Hyvonen Department of Biochemistry, University of Cambridge mh...@cam.ac.uk +44-(0)1223-766 044 @HyvonenGroup http://www-cryst.bioc.cam.ac.uk/groups/hyvonen

[PyMOL] Fwd: Re: Viewer Window Clipped at Border

+ From: Marko Hyvonen To: Nicholas Fitzkee Sounds like the same problem I had recently (Nvidia graphics not used for PyMOL, but the built in

Re: [PyMOL] Color backbone amide nitrogen

shdot ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Marko Hyvonen Departme

Re: [PyMOL] Unsubscribe pymol user mails

.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Marko Hyvonen Department of Biochemistry, University of Cambridge mh...@cam.ac.uk +44 (0)1223 766 044 @HyvonenGrou

Re: [PyMOL] Calculate RMSD between ligands from a crystal structure and from a docking

_ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Marko Hyvonen Department of Biochemistry, Un

Re: [PyMOL] Calculate RMSD between ligands from a crystal structure and from a docking

@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Marko Hyvonen Department of Biochemistry, University of Cambridge

Re: [PyMOL] Please unsubscribe me

@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe -- Marko Hyvonen Department of Biochemistry

Re: [PyMOL] How to manually define the lower and upper limit of vacuum electrostatics?

regards. Yeping ___ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe -- Marko Hyvonen Departm

Re: [PyMOL] Selection of elements in object

rs@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe -- Marko Hyvonen Department of Biochemistry, University of Cambridge mh...@cam.ac.uk +44 (0)1223 766 044 @HyvonenGroup http:

[PyMOL] Scroll wheel not slabbing

round'])   File "C:\Python39\lib\site-packages\Pmw\Pmw_2_0_1\lib\PmwColor.py", line 359, in bordercolors     '#%04x%04x%04x' % (lightRGB[0], lightRGB[1], lightRGB[2]), TypeError: %x format: an integer is required, not float -- Marko

Re: [PyMOL] Scroll wheel not slabbing

   File "C:\Python39\lib\site-packages\Pmw\Pmw_2_0_1\lib\PmwColor.py", line 359, in bordercolors '#%04x%04x%04x' % (lightRGB[0], lightRGB[1], lightRGB[2]), TypeError: %x format: an integer

Re: [PyMOL] hiding the main chain for a named selection?

Hi Colin, >From memory (and assuming no hydrogens) hide everything, name C+N+O & yourselection Marko ----- Marko Hyvonen Department of Biochemistry University of Cambridge mh...@cam.ac.uk https://hyvonen.bioc.cam.ac.uk @HyvonenGroup From: Colin Dolp

[PyMOL] Slab on external screen with open source PyMOL

indow back to laptop screen, but no action on the second screen. Shift-Right-Mouse for front/back clip works, as does command line eg. "clip slab, 10". Just not scroll wheel slab. Anyone had the same and been able to fix it or suggestions on what to try? Cheers, Marko ----- Marko H