[PyMOL] Reducing the surface rendering load for JSmol export

2013-07-15 Thread Greeves, Nick
I am interested in displaying PyMOL session files using JSmol http://sourceforge.net/projects/jsmol/ Basically this works but some of the session files have high resolution surfaces which put a tremendous strain on JSmol/browser when they are displayed. I am new to PyMOL and cannot see how t

[PyMOL] Reducing the surface rendering load for JSmol export

2013-07-18 Thread Greeves, Nick
Thanks Thomas and Bob, I had tried surface_quality with little effect. The "doCACHE" option does indeed shrink the files which make the web transfer faster but then JSmol still has to work very hard to render the large molecules and their surfaces. Once loaded the generation of molecular surfac