Re: [PyMOL] Saving the Connolly surface of a PDB

2011-04-08 Thread Francois Berenger
ace Pymol is writing to a .obj file. Thanks a lot, Francois. > Cheers, > > -- Jason > > On Fri, Feb 25, 2011 at 3:05 AM, Francois Berenger wrote: >> Hello, >> >> Is it possible to save the Connolly surface >> computed by Pymol without any rotation

[PyMOL] Saving the Connolly surface of a PDB

2011-02-25 Thread Francois Berenger
Hello, Is it possible to save the Connolly surface computed by Pymol without any rotation and translation added compared to the PDB from which the atom coordinates were read? I looked at the .obj file output and find there was some centering done and also some rotation added. Thanks a lot, F. -

Re: [PyMOL] Saving the Connolly surface of a PDB

2011-02-27 Thread Francois Berenger
as nothing to do with the input PDB. Regards, F. > Cheers, > > -- Jason > > On Fri, Feb 25, 2011 at 3:05 AM, Francois Berenger wrote: >> Hello, >> >> Is it possible to save the Connolly surface >> computed by Pymol without any rotation and translation >&

[PyMOL] Question about the .obj file saved by Pymol

2011-03-02 Thread Francois Berenger
Hello, If I use "save myscene.obj" and I was looking at the surface representation of a molecule, does the file contains only the external surface of the protein, or are the internal cavities also included? Thanks, F.

[PyMOL] Question about the .obj file saved by Pymol

2011-03-02 Thread Francois Berenger
Hello, If I use "save myscene.obj" and I was looking at the surface representation of a molecule, does the file contains only the external surface of the protein, or are the internal cavities also included? Thanks, F.