Hi,
I made Molecular Dynamics studies on a wildtype enzyme and its mutants. To
compare the structures (in pymol 40 states for each enzyme) I have to find out
which state of the one enzyme has the best rms to the other enzyme. Are there
possibilities to solve this problem in pymol or maybe in p
Hi,
I need the rms values from pymol in an extra output file.
I tried to make it the same way like in the pymol / python example for
intra_rms.
rms = cmd.rms (selection1, selection2)
but it doesn't work.
Is this command line correct, or there are other possibilities to get access
to the vari
Hi,
I used the distance command:
cmd.dist(" (/mol1///1/C)","(/mol1///2/C*)").
In pymol it creates a new distance object with all distances from C in Residue
1 to every C in Residue 2.
How can I split this object to single distance objects?
Or there are better possibilities because I want to w
Hi,
I used the distance command:
cmd.dist(" (/mol1///1/C)","(/mol1///2/C*)").
In pymol it creates a new distance object with all distances from C in Residue
1 to every C in Residue 2.
How can I split this object to single distance objects?
Or there are better possibilities because I want to w
