[PyMOL] ray-tracing cones

2013-08-19 Thread Bryn Fenwick
GB Color 1 0.0, 0.0, 1.0,# RGB Color 2 0.0, 0.0, # Caps 1 & 2 ] ) cmd.load_cgo(o, name) cmd.extend('cone', cone) -- R. Bryn Fenwick, Structural and Computational Biology, The Scripps Research Institute, 10550 North Torrey

[PyMOL] translation without rotation

2009-05-06 Thread R. Bryn Fenwick
center all translate [-60.0,0.0,0.0],1 translate [60.0,0.0,0.0], 2 R. Bryn Fenwick -- The NEW KODAK i700 Series Scanners deliver under ANY circumstances! Your production scanning environment may not be a perfect world

[PyMOL] export frames as pdb

2010-06-24 Thread R. Bryn Fenwick
Hi, I have a pdb file that has some models in it. when I open this file they are read in as frames, however now I would like to write them out as frames in a model file. how can i do that? Many thanks, R. Bryn Fenwick

[PyMOL] ideal beta-sheet

2010-07-21 Thread R. Bryn Fenwick
Hi, I would like to build an ideal beta-sheet fold. Can anyone suggest how to do this with pymol or any other program. I have already tried with the build command, however I am not sure how to proceed once the first strand is built. Many thanks, Bryn -

[PyMOL] pymol

2010-11-03 Thread R. Bryn Fenwick
naming, Hi, I have just been looking at the 1.3 build of pymol that comes from FINK and see that in the build menu that both residues N and Q have the shortcut N. Bryn R. Bryn Fenwick -- Achieve Improved