[PyMOL] Pymol 2.1 graphics error

2018-05-09 Thread Andreas Tosstorff
)   GL_VERSION:  3.0 Mesa 17.0.1 GL_ERROR : 1282" I'm new to Pymol and Linux so please excuse me if I'm missing something. Thanks, Andy -- M.Sc. Andreas Tosstorff Lehrstuhl für Pharmazeutische Technologie und Biopharmazie Department Pharmazie LMU München Butenandtstr. 5-13 ( Haus B)

Re: [PyMOL] Pymol 2.1 graphics error

2018-05-11 Thread Andreas Tosstorff
ely, even on a wired local network. On May 9, 2018, at 8:01 PM, Andreas Tosstorff wrote: Hi all, I just installed PyMol 2.1 on my system (Centos 7) and there are some issues with displaying any structures. I get the following error, however I'm not sure whether that's what&#

[PyMOL] Pandas module in Pymol

2018-11-21 Thread Andreas Tosstorff
Hi all, I am trying to use pandas in a script in pymol. These are the first lines of the script: from pymol import cmd, stored, math import pandas as pd I get the following error message when running the script: 'module 'pandas' has no attribute 'plotting' File "/home/andt88/anaconda3/lib/p

[PyMOL] Molecular surface area

2019-05-19 Thread Andreas Tosstorff
Hi all, I am looking for the method by which the get_area command calculates the molecular surface area when dot_solvent=0. It is described for SASA in the mailing list but I could not find it for the default method. Thanks a lot for your help! Andreas __