[PyMOL] Color by Atom from CLI (not PyMol's GUI)

Hi. I'm working with PyMol's Python API from the terminal. I would like to color the molecules in my session by atom using the command util.cbac(). I want them in cyan because I'm deleting the two molecules involved and reopening the files with those molecules several times inside a loop. My first

Re: [PyMOL] [EXTERNAL] Color by Atom from CLI (not PyMol's GUI)

Hi Antonio, I got the same error message after the second line but this worked for me. /Applications/PyMOL.app/Contents/bin/python >>>from pymol import cmd >>>fcmd.fetch("5da6") >>>fcmd.do("show sticks; hide cartoon;orient") >>>fcmd.util.cbac('all') >>>fcmd.png("testcbacSticks.png") Best regards

[PyMOL] How to make a dimer from a monomer

Hi PyMol users, Can you give me the tutorial on how to make a dimer from a monomer based on a template protein I have? Thank you Maryam ___ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: http