[PyMOL] Calculating binding energy of ligand with protein

Hi PyMOL user, Is this possible to calculate the binding energy of ligand with protein using Pymol? If yes can you refer me some sources how I can do this task? Thank you Maryam ___ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-user

[PyMOL] Optimize the bond distance of ligand with protein

Dear Pymol user, I am trying to do molecular docking using Autodock vina. But when I insert the ligand and the protein, the distance of ligand is very far from protein (~7 angstrom) Is there any way to decrease the distance in pymol before doing the docking? Thank you Maryam ___