Hello,
I have recently prepared a script for Pymol that works well in
evaluating RMSD values for a list of residues from proteins of interest
(targetted residues are generated by script embedded commands). However,
I wished to implement the script to allow the user to select what
residues to analys
Dear Pymol Fanatics,
I would like to show the valence of ligand bonds only and not those of the
surrounding amino acid residues. Is there any easy way to do this, aside
from manually editing every bond? I’m also curious how one would set the
stick_ball setting for a single object and not the rest
Hi Chris,
Here is a one compound setting command (copy and paste at the PyMOL command
prompt above the viewport) that turns on valence for the ligand bonds
in ligand RZS of the covid-19 protease structure PDB 5R82 while turning
off the valence for the protein bonds.
set valence, on, resn RZS; set
