Re: [PyMOL] distance

2018-10-26 Thread Joseph Brock
Thanks Jarrett! I will try that! Cheers, Joseph. Joseph S. Brock | PhD Researcher Drew Lab Department of Biochemistry and Biophysics Stockholm University From: Jarrett Johnson Sent: Friday, 26 October 2018 12:23:46 AM To: Joseph Brock Cc: Pymol User list Subje

Re: [PyMOL] distance

2018-10-26 Thread Joseph Brock
Hi again Jarrett, I have built the latest version from git (PyMOL 2.3.0a0 Open-Source) on my system. The behaviour is still there, but I realise that this it is now only when the selection is a ligand. For instance trying to find polar contacts between a ligand and sourrounding side chains.

Re: [PyMOL] distance

2018-10-26 Thread Thomas Holder
Hi Joseph, Thanks for the example, I can reproduce it! Not sure if this should be considered a bug, or just a misleading user interface. "involving side chains" really means "side chains within selection". There are none if you only select the ligand. If I instead click on "to other atoms in ob

Re: [PyMOL] distance

2018-10-26 Thread Joseph Brock
Hi Thomas, Thanks for clarifying this for me! Cheers, Joseph. Joseph S. Brock | PhD Researcher Drew Lab Department of Biochemistry and Biophysics Stockholm University From: Thomas Holder Sent: Friday, 26 October 2018 3:41:40 PM To: Joseph Brock Cc: Jarrett J