Re: [PyMOL] Valence bonding ray trace in batch mode

2017-07-05 Thread Thomas Holder
Hi Gianluca, I can reproduce the problem and found the bug. This is already fixed in Incentive PyMOL. For Open-Source PyMOL, you can apply the attached patch. Cheers, Thomas stick_ball-valence-ray.patch Description: Binary data > On Jul 4, 2017, at 3:39 PM, Gianluca Tomasello wrote: > >

Re: [PyMOL] Valence bonding ray trace in batch mode

2017-07-05 Thread Gianluca Tomasello
Hi Thomas, the script below reproduce the behavior for me. I don't use pymolrc file or k flag. I loaded the script like this and two different behaviors were detected on the renderised image. 1) pymol script.py 2) pymol -c scritp.py from pymol import cmd cmd.fetch("1c0k","a",async=0) cmd

Re: [PyMOL] Valence bonding ray trace in batch mode

2017-07-05 Thread Gianluca Tomasello
Great! Thanks for the help Thomas. It works fine! 2017-07-05 12:34 GMT+02:00 Thomas Holder : > Hi Gianluca, > > I can reproduce the problem and found the bug. This is already fixed in > Incentive PyMOL. For Open-Source PyMOL, you can apply the attached patch. > > Cheers, > Thomas > > > > > > On