Re: [PyMOL] Pymol cavity detection error?

2017-06-29 Thread kanika sharma
Hi Tsjerk, I tried two_sided_lighting but doesn't have effect. Apparently, irrespective of the protein the surface is always a black exterior. Now, I tried display - use display lists and that solves t but makes the program extremely slow and heavy. Problem in the interface? Anyone experienced thi

[PyMOL] ray 2400 (NOT ray_trace) each frame of a movie

2017-06-29 Thread Academic Research
So far there is only info about how to "ray_trace" each frame of a movie while exporting to .png images. My question: How can I "ray 2400" each image (regardless of my computer screen size - because I have a small computer) so i can get very high resolution images that i can combine together

Re: [PyMOL] ray 2400 (NOT ray_trace) each frame of a movie

2017-06-29 Thread Thomas Holder
Hi AC, In PyMOL 1.8.6 we added width and height arguments to the mpng command. So this is now possible: set ray_trace_frames mpng imageprefix, width=2400 With older PyMOL versions, you have two options: 1) Run PyMOL headless (pymol -c script.pml) so that the display doesn't limit the view