Re: [PyMOL] Compile error svn 4162

Hi Quyen, This should be fixed in svn rev 4163. Cheers, Thomas On 18 Oct 2016, at 01:05, QT wrote: > Dear all, > > I'm having a compile error that I've never had before on the current svn > revision 4162. Compile broke on file CifDataValueFormatter.cpp > > g++ -pthread -std=c++0x -fPIC -

[PyMOL] Iterating through all objects and calculate RMS

Hi There, I am trying to calculate the rmsd of all ligands loaded in the pymol with reference to a reference ligand using a script. My current script looks like this, myobjects = cmd.get_object_list() print myobjects cmd.select('sele', "F60_target_14 and resn UNK") cmd.create('obj01', 'sele')

Re: [PyMOL] Iterating through all objects and calculate RMS

Looks like you’re missing a space in the string ‘and resn UNK’, it should be: i + ‘ and resn UNK’ Regards, Gabriel Marques > On Oct 18, 2016, at 1:57 PM, Subha K wrote: > > Hi There, > > I am trying to calculate the rmsd of all ligands loaded in the pymol with > reference to a reference liga

Re: [PyMOL] Iterating through all objects and calculate RMS

Oh yeah, thanks a lot Gabriel Marques. I figured out the rms_cur part too. On Tue, Oct 18, 2016 at 12:23 PM, Gabriel Marques < gabriel.marq...@schrodinger.com> wrote: > Looks like you’re missing a space in the string ‘and resn UNK’, it should > be: i + ‘ and resn UNK’ > > Regards, > Gabriel Marq