Hi, I carry on my research work on protein-dna complex
system.I have one dna pdb and one protein-dna complex pdb.I want to make new
protein-dna complex pdb taking dna from single pdb and protein from
protein-dna complex.Protein possess similar DNA-binding specificities.I
superimpose two pdb
Select the protein you want and the dna, then save the selection as a PDB.
There are many ways to make a selection; visually, the easiest might be:
You said you’ve removed the DNA from the protein-dna complex, so now you should
have:
(1) an object that has just your protein that you want in the
