Dear Pymol Users!
Here I desice to continue my topic regarding scripting in Pymol;
My current task:
I have 1 X-ray structure of cythochrome-C with HEME residue embedded
within the protein as a cofactor
I have 10 snapshots of cythochrome-C from MD trajectory where HEME was
not present explicitly
Hi Pymol users,
The "ray command" is not working in my Educational version of Pymol. It seems
that educational version does not allow to use this command.
Does anyone have a solution for this please?
Your reply is very much appreciated.
Cheers
Mohsen
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Hi Mohsen,
What happens? What error do you get?
Best,
Tsjerk
On Jul 12, 2016 10:46 AM, "Mohsen Chitsaz"
wrote:
Hi Pymol users,
The “ray command” is not working in my Educational version of Pymol. It
seems that educational version does not allow to use this command.
Does anyone have a sol
Hi Mohsen,
So raytracing is indeed not available in the educational version. I find
this a bit strange, as I regarded the educational version the
least-changed-with-respect-to-the-original (say 0.99), which did have
raytracing available. Also, I like students to give me reports with pretty
picture
Dear pymol users!
I need to estimate how the side-chains dynamics are differs in MD
compared to X-ray structure.
Assuming that I have 2 structures one from md and another from X-ray
and I select Sidechains from the both as obj1 and obj02
select xray &! n. n+ca+c+o
select md &! n. n+ca+c+o
now tr
