[PyMOL] holes in isosurface representation

Hi all, I am using the maps and isosurface to represent a large protein protein complex, however whenever I generate a a map then isosurface it has holes in it areas that are not complete. I don’t understand as it surface representation it is a complete, closed surface? Anyone have any ideas a

[PyMOL] Dot representation

Hell Pymolers, 1. Does anyone know what the dot representation for a residue represents? Is it the van der waals radii? 2. Is there a way to draw transparency for the dots? -Yarrow -- Yarrow Madrona, Ph.D. *Postdoctoral Scholar* University of California, San Francisco Department of Pharmaceut