Re: [PyMOL] Reset Default Carbon Color

2013-04-11 Thread Thomas Holder
Hi Wilson, interesting question and actually there is no command to control this. Howevery, it's possible, there is a setting which doesn't have a name. In the latest 1.6alpha, you can do: # reset color cycle cmd.set(239, 0) In older PyMOL versions, this should work: # reset color cycle _cmd.se

Re: [PyMOL] conect records?

2013-04-11 Thread Thomas Holder
Hi Boris, can you be more precise with your question? What file type did you load (pdb?), which connections (I assume you mean bonds) are wrong? Cheers, Thomas Boris Kheyfets wrote, On 04/09/13 19:30: > Hello PyMOL users, > > I study system which has 160919 residues, and 217021 atoms (it is >

Re: [PyMOL] Reset Default Carbon Color

2013-04-11 Thread Wilson Omesiete
Thank you for your suggestion, Tsjerk Wassenaar, and thank you for your answer, Thomas Holder. Using _cmd.set(cmd._COb, 239, (2, (0,)), '', -1, 1, 0) ... Does exactly what I was looking for. On Thu, Apr 11, 2013 at 2:58 AM, Tsjerk Wassenaar wrote: > Hi Wilson, > > I don't know how to r