[PyMOL] protein-ligand interaction

2012-11-05 Thread amna khan
hi all i am new user of pymol i want to know i could show just the part of protein intercting with ligand and want to hide the rest portion of protein.the non-interacting reisues should not be displayed? how can show the small hydrogen bond less than 2 ? regards amna khan

Re: [PyMOL] protein-ligand interaction

2012-11-05 Thread Jason Vertrees
Hi Amna, > i want to know i could show just the part of protein intercting with ligand > and want to hide the rest portion of protein.the non-interacting reisues > should not be displayed? Next to your protein name, click A > Preset > Ligand Sites > Cartoon. Now you can hide the protein that's no