Hi PyMOL Community,
I have a PyMOL script that I have written that starts with the following kind
of format:
-from pymol import cmdfrom re import *
def test (*args, **kwargs):
var1=0 sel=""
for key in kwargs:if (key == "var1"): var1=int(kwargs["var1"])
elif (key
Hi Sean,
The pymol syntax for getting help on a command is "help command". I
think it is a wrapper around the python help function, for which the
syntax is "help(command)". In your case, it would only show something
like:
test(*args,**kwargs)
You can write a docstring, e.g. similar to the ones i
Hi fellow PyMOLers,
Thought some of you may be interested in this:
http://pymolwiki.org/index.php/GLSL_Shaders
Test, improve, share ... :-)
Cheers!!
-- Shiven
--
Live Security Virtual Conference
Exclusive live eve
Hi,
I am planing to purchase a LOW-COST "3D Protein Cave" consisting of a 3D
capable projector (720p @ 120Hz or DLP 3D Ready?) and a windows 7
computer with a quadro 2000 card. However, I am a bit sceptic about the
sync problem which leads to ghosting.
main Questions:
1) Is anyone out there s
> 2) Is anyone out there succesfully running a 3D projektor using the DLP
> Link option (white flash in between images to sync the glasses). Is this
> technique being used at all (for true stereoscopic 3D software such as
> Pymol, Coot, Yasara, etc.) by anyone?
Yes, we have theInfocus IN3116 which
Hi,
Does anyone use pymol for very large structures, such as a full virus
60-mer capsid? If so, what processing power, memory, graphics card, etc. do
you need to render these large files and manipulate them without any
slowing? PyMol takes about 1 minute to think after trying to spin one of
these
Hi Sean,
the usage message is generated by introspection, so with your implicit
arguments declaration it's not possible to get an informative usage
message. But you can add a docstring which will be displayed with "help
test" instead of "test ?".
def test(*args, **kwargs):
'''
DESCRIPTION
Hi Shane,
I've been playing with a virus 60mer on an intel core i7 workstation with
6Gb memory with good response. Just make sure you use the latest incentive
or open source version and have a good graphics card.
Cheers,
Tsjerk
On Jun 14, 2012 11:49 PM, "Shane Neeley" wrote:
Hi,
Does anyone
Thomas, thanks this works perfect.
Jason, I've tested this script on my system ( this is the membrane
protein inserted in the bilayer surrounded by two water layers ( up and
down ). During simulation individual water mollecules move into the protein
interiour ( in that case protein like a water
