Hi Sajeewa,
> [...]
> If I follow wizard --> measurements --> distance it asks for atoms to
> click on, but as the tunnels are empty space when I click on the
> starting points of the tunnels nothing is recognized.
> What would be the most accurate way of measuring the above two distances?
The tu
Have you tried this:
http://www.pymolwiki.org/index.php/Examples_of_nucleic_acid_cartoons
Best
Troels Emtekær Linnet
2012/4/2 Francis E Reyes
>
> Tricky one I tried hide cartoon, name P but no go..
>
> instead cartoon skip will do it.
>
>
>
> On Apr 2, 2012, at 2:50 PM, Eike Schulz wrote:
Hi Vaibhav,
First: I assume you did NOT copy the "PocketPickerScript" to "C:\Program
Files\DeLano Scientific\PyMOL\modules\pmg_tk\startup", otherwise there
would not be a "No such file" error.
Second: The plugin does not use the best coding style, it has hard coded
file paths. So I would not b
Hi,
This is unrelated to PyMol, but I just wanted to spam the community to see
what they think about different protein parameters. Let me know if this
sort of question is inappropriate for the forum.
I have thousands of randomly generated 7 amino acid peptide sequences that
are within a virus. As
Hi Shane,
Whilst I am no expert, I would think possible a sequence motif (based on amino
acid composition) may help. It may show up certain amino acids at specific
points. Given the short length of the peptides, the question is what are they
used for?
Hope this helps
__
Dear Colleagues,
We would like to point out that the application deadline for the 5th annual
CCP4 Summer School "From data collection to structure refinement and beyond" is
April 17, 2012. The school will take place from June 19 through June 26, 2012
at the Advanced Photon Source (APS) near Chic
Hi Shane,
I think I meant weblogo which shows frequency of amino acids
e.g. http://weblogo.berkeley.edu/
Sorry for the confusion
J
_
Joel Tyndall, PhD
Senior Lecturer in Medicinal Chemistry
National School of Pharmacy
University of Otago
PO Box 56 Dunedin 90
