Re: [PyMOL] Protein-ligand interactions

2012-01-20 Thread Thomas Holder
Hi James, > 1- Some of my proteins consist of ligand wich include some of amino > acids from sequence of my protein ( e.g fluorophores in GFP). So I'd > like to assign some residue motif as the ligand group ( e.g Ser Tyr Gly > motif in GFP). How I could do it? The preset selects hetatoms as ligan

[PyMOL] error calling external python script in a PyMoL plugin

2012-01-20 Thread Mister Vanhalen
pymol-users@lists.sourceforge.net Hi pymolers, I'm writting a PyMoL plugin where I have to execute an external python script. I've got a problem: My external script is not executed in the PyMoL plugin. I've tried to localize the issue with a very small example : in the PyMol plugin : args = ("/h

[PyMOL] sequence in the image

2012-01-20 Thread Osvaldo Martin
Hi, PyMOL has an option to save the current view as an image, but it is possible to include the sequence in the image? Cheers, Osvaldo -- Keep Your Developer Skills Current with LearnDevNow! The most comprehensive online