Re: [PyMOL] Problem with open source pymol

2011-12-21 Thread lina
If you have fink, you can have an alternative way of installation. fink install pymol-py27 It works well. On Wed, Dec 21, 2011 at 4:19 AM, Lauren Porter wrote: > Pymol 1.3 is still available online, but it doesn't work with any versions > of python greater than 2.5.  If I try to install Pymol

[PyMOL] Forced Linux/Python upgrade, killed PyMol, please help!

2011-12-21 Thread John Ladasky
Hello everyone. It has been a while since I posted here. Apologies to the admins, I tried to subscribe again, and I forgot that I was already subscribed. For some non-PyMol work, I was obligated to upgrade my operating system to Ubuntu Linux 11.10. In fact, the specific reason that I had to

[PyMOL] How to overcome bond length restriction to build a general stereo geometric model

2011-12-21 Thread Shaoqing Zhang
I want to build a geometric model with HETATM as general particles, and put CONNECT information to show the bonds between the particles. But the bond length is very big comparing with those of the usual chemical bonds. The bonds do not show up in pymol. How to solve this problem? Thank you very

Re: [PyMOL] Forced Linux/Python upgrade, killed PyMol, please help!

2011-12-21 Thread Robert Campbell
Hi John, On Wed, 2011-12-21 11:12 EST, John Ladasky wrote: > Hello everyone. It has been a while since I posted here. Apologies to > the admins, I tried to subscribe again, and I forgot that I was already > subscribed. > > For some non-PyMol work, I was obligated to upgrade my operating s