Hi all,
I can't get the functions to load pdb-data from the internet to work
under Linux. Neither "fetch" nor "load http://..."; nor the plugin
remote_pdb_load.py will work (connection error - please check your
internet access).
Under windows at least the load... method and the plugin are operab
Hi,
Does anyone know how to get a hold of the viewport dimensions from
within a script? I vaguely remember some posts about this subject, but
could not find anything in my archive.
Thanks
Carsten
--
Come build w
Hi Carsten,
Is this what you are looking for?
http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg05888.html
Best regards,
Folmer Fredslund
2009/9/24 Schubert, Carsten [PRDUS] :
> Hi,
>
> Does anyone know how to get a hold of the viewport dimensions from within a
> script? I vaguel
Yep,
thanks Folmer
> -Original Message-
> From: Folmer Fredslund [mailto:folm...@gmail.com]
> Sent: Thursday, September 24, 2009 9:33 AM
> To: pymol-users@lists.sourceforge.net
> Subject: Re: [PyMOL] Viewport dimensions query
>
> Hi Carsten,
>
> Is this what you are looking for?
> http:
Joachim,
PyMOL relies entirely upon Python's built-in proxy support (via urllib),
so if you can get a Python script configured to work properly through
your proxy, then PyMOL should work as well.
http://www.python.org/doc/2.5.2/lib/module-urllib.html
Cheers,
Warren
Hi,
I'm having an issue trying to run various plugins in pymol (apbs and
autodock). Whenever I select a button that should bring up a file browser
to choose a file (e.g. "Choose Externally generated pqr" in apbs) Pymol
exits with: Segmentation fault (core dumped). Same thing happens when I go
to
Ian,
Based on that traceback, it looks like you have two conflicting versions
of Tcl (8.4 as well as 8.5) linked against and running in the same
process...that could be the source of the crash.
Cheers,
Warren
From: Ian Berke [mailto:ian.be...@yale.edu]
> Does anyone have any thoughts?
Two things to try that may or may not help:
1. Check if the problem persists when running pymol in single-threaded
mode ("cmd.set('max_threads',1)"). libpthread in the trace might
indicate that one of the libraries is having issues with multiple threads.
2. On
Thank you! This was indeed the case. I have no idea why tcl/tk 8.4 was
installed with 8.5 at the same time. Removing 8.4 and using 8.5 seems to
have fixed the problem.
Ian
On Thu, Sep 24, 2009 at 2:38 PM, Warren DeLano wrote:
> Ian,
>
> Based on that traceback, it looks like you have two co
