[PyMOL] Grid_mode - reference structure

2009-05-05 Thread Höfling Martin
Hey Folks, First of all: Grid Mode is awesome! Maybe I have overlooked a feature, but it seems to me that it is impossible to show a reference structure in all grids. Is there a better way than duplicating the object for every grid cell? Best Martin ---

Re: [PyMOL] Grid_mode - reference structure

2009-05-05 Thread Warren DeLano
Martin, set grid_slot, -2, object-name for the object you wish to spread across all grid slots. Cheers, Warren -Original Message- From: Höfling Martin [mailto:martin.hoefl...@gmx.de] Sent: Tue 5/5/2009 5:02 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] Grid_mode - reference

[PyMOL] diehedral angle

2009-05-05 Thread Vivek Ranjan
Hello, I would like to change some of the diehedral angles in a polymer systems. I know how to measure diehedral angle. However, I don't know how to change it ? Any advice is greatly appreciated. -- Thank you and Regards, Vivek Ranjan ---

Re: [PyMOL] diehedral angle

2009-05-05 Thread Warren DeLano
Vivek, # new command in 1.2b5 - fabricate peptide, ALA trimer: fab AAA # set a dihedral value ro 180 degrees. set_dihedral 1/C, 2/N, 2/CA, 2/C, 180 Cheers, Warren From: Vivek Ranjan [mailto:vran...@gmail.com] Sent: Tue 5/5/2009 12:09 PM To: pymol-user