Dear people
Is there somewhere in pymol that will allow me to print or otherwise get
access to per-residue rms-values when doing a structural superposition?
Regards
/Per Larsson
Hi
I seem to be having trouble running pymol (v1.0, gentoo) in the background
from a terminal, neither appending "&" nor "ctrl+z" followed "bg" is doing
the trick. In both cases pymol freezes during certain operations, eg opening
pdbs, drawing cartoon. The window controls themselves respond. Don'
Hey Gordon,
I don't quite understand your problem. Pymol can be run in the
background (or even remotely) by calling it as
pymol -qc script.py
When you want to use it interactively, the shell it was started from is
used for all sorts of output. Why do you need this shell? Just open
anothe
HI!
I tried it with the latest version in the portage in an login shell and
both went fine, working in the shell and using pymol. I'm using eterm.
What about using screen?
justin
Gordon Wells schrieb:
Hi
I seem to be having trouble running pymol (v1.0, gentoo) in the
background from a ter
Try redirecting stderr and stdout to a file -- the process may be getting
suspended by the shell due to output.
csh/tcsh:
pymol -qc script.pml >& pymol.log
sh/bash:
pymol -qc script.pml > pymol.log 2>&1
_
From: pymol-users-boun...@lists.sourceforge.net
[mailto:pymol-users-bou
Hi,
To perform the mutations I have followed the steps as per:
http://www.pymolwiki.org/index.php/Mutagenesis
However, step 6. (apply) results in this:
Selector-Error: invalid model "and".
( ( Model and _mutate_sel ) )<--
Anyone with any ideas?
Cheers
Mitch
--
Mitchell Jon Stanton-Cook
PhD
Dear Jack and Bill,
You were both right- the fink install was a total bear. I needed to
re-install fink, and ran into lots of problems with the self-update from
there. I did get it to finally work, though-pymol looks great!
And Bill- thanks for the pointer to your webpages. You maintain a vital
