Re: [PyMOL] Using "slice" on a map

2007-04-30 Thread DeLano Scientific
Evan, By default, the slice tracks with the 3D center of the camera view. If you turn off tracking, then you can rotate the camera independently of the slice. Then, with the mouse in 3-button-editing mode you can manipulate it with shift-click-and-drag actions. Height map is self-explanatory (o

Re: [PyMOL] failure to save coordinates adjusted with edit tool

2007-04-30 Thread DeLano Scientific
Stuart, Empty PDB files can result from writing a file while PyMOL's global state number is set to a numerical state that does not actually contain the coordinates. Note that by default, single state objects are displayed in all states (unless static_singletons is disabled), which can cause some

Re: [PyMOL] PyMOL compilation from source

2007-04-30 Thread DeLano Scientific
Andreas, Try removing -D_FORTIFY_SOURCE=2 as a compiler option... PyMOL's macros sometimes choke on that. Cheers, Warren > -Original Message- > From: pymol-users-boun...@lists.sourceforge.net > [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf > Of Andreas Henschel > Sent: