[PyMOL] vdw radii

2007-02-06 Thread Nalam, Madhavi
Hi, In PyMOL, do the dots and spheres represent the vdW radii of the atoms? If so, how can I find the default values for each element? If not, what is the command to show the vdW spheres? Thanks in advance, Madhavi

[PyMOL] error on debian w/ pymol -c foo.pml

2007-02-06 Thread xavier siebert
Hi, I am using the pymol package provided with Debian testing (0.98+0.99r). When I am trying to run a script without the gui, i.e. pymol -c foo.pml, I get the following error : Traceback (most recent call last): File "/var/lib/python-support/python2.4/pymol//__init__.py", line 364, in ? invoc