Re: [PyMOL] PyMOL-users Digest, Vol 5, Issue 22

2006-10-28 Thread Andreas Forster
Oh, works like a charm. (If you're a bit more descriptive about your problem, we can help you better.) Andreas surendra negi wrote: Is there any 32 bit version of pymol? I am unable to install it in XP - Original Message

[PyMOL] color in pymol

2006-10-28 Thread shivesh kumar
Dear all, How can I use the color option in the Setting menu(Edit all) to get more color in the cartoon.Thanx. Shivesh shivesh shivesh - Get your email and see which of your friends are online - Right on the new Yahoo.com

Re: [PyMOL] color in pymol

2006-10-28 Thread DeLano Scientific
> How can I use the color option in the Setting menu(Edit all) > to get more color in the cartoon.Thanx. What do you mean by "more color in the cartoon"? You set the cartoon color independently using a command such as: set cartoon_color, color-name for example set cartoon_color, red Cheers,

Re: [PyMOL] color in pymol

2006-10-28 Thread andreas
Hey Shivesh, you can get more color in your cartoons by coloring every residue differently. color red, i. 20 color blue, i. 21 color yellow, i. 22 Don't pay too much attention to the menus. They're really just there so traditional Mac and Windows users to get scared when they start using PyMOL.

[PyMOL] question about domain movement

2006-10-28 Thread Qun Wan
Hi, I have built two models from one protein molecule with the different nucleotides bound: one is ATP, one is ADP. Their overall structures are similar except that a few secondary structure domains shift. For example, alpha4 helix has move left for about 1.2Å and rotate about 4º. Could I use pymo