Re: [PyMOL] Re: New spectral color pallette

2006-01-05 Thread Robert Campbell
Alexander, * alexander.paut...@bc.boehringer-ingelheim.com wrote: > > > > I would like to color my protein according to B-factor with a self-defined > > spectral palette (In this case I have put sequence conservation into the > > Bfactor this column). I found that > > spectrum b, blue_whit

[PyMOL] how to extract corresponding residue pairs after alignment ?

2006-01-05 Thread Indraneel Majumdar
Hi, Is there any way to extract corresponding residue/atom pairs after alignment? eg. the atoms that are used to create the cgo when "object" option is specified. (I guess this is probably in op1.ai1VLA and op2.ai1VLA in layer3/Executive.c ?) Thanks in advance, Indraneel -- http://prodata.swmed