Hi Warren,
I did a lot of work with PyMOL, and want to cite your work in my thesis.
Is there any publication of PyMOL to reference to, or should I just take this:
[Delano2005] The PyMOL molecular graphics system, DeLano Scientific LLC, 400
Oyster Point Blvd., Suite 213, South San Francisco, CA 94
Hi, all,
I am a new user of Pymol, and have a simple question now.
If I open a pdb file which was download from rcsb.org, the ribbon or
cartoon can be show. But when I open a pdb file which only contains
atom coordinate and CONECT, then I can't show the cartoon or ribbon.
Maybe this seems to be a
Li,
If you load a protein structure without secondary structure assignments,
PyMOL should assign then automatically. If not, then try running the
"dss" command on the structure followed by "show cartoon".
Cheers,
Warren
--
Warren L. DeLano, Ph.D.
Principal Scientist
. DeL
Hey everyone,
I remember at some point there was a command you could issue to pymol to
generate a simulated electron density map around a structure. I'm trying to
do this for a cover figure. Does anyone remember what the command (and
syntax) is and if you can set the resolution (I actually wa
Anbang Li,
9 out of 10 new PyMol users find the PyMolWiki very helpful*. Check out
http://www.pymolwiki.org/
There are images, tutorials and scripts to automate some harder tasks.
HTH,
-- Jason
* -- Statistics purely made up.
On Thu, 2005-10-06 at 20:07 -0700,
pymol-users-requ...@lists.sou
