[PyMOL] gradient color scheme in pymol

2005-05-06 Thread Bingding Huang
Is there any gradient color scheme in pymol? i.e, different residues have different values and I want to color them in a gradient color scheme in pymol. For example, green for a value of 1, blue for a value of 2, red for a value of 5 and so on! Thanks! -- Bingding Huang PhD student

Re: [PyMOL] gradient color scheme in pymol

2005-05-06 Thread Bingding Huang
Another question, Is it possible to use RGB color in pymol like color [0,128,255], resn CYS ? I tried it but it failed in pymol! Thanks? Is there any gradient color scheme in pymol? i.e, different residues have different values and I want to color them in a gradient color scheme in pymol. Fo

[PyMOL] PyMOL versus WinXP, SP2

2005-05-06 Thread Thomas Stout
Has anyone on the list successfully installed PyMOL (especially v0.98) on a Win box running XP, Service Pack 2? We are considering allowing our IT department to "upgrade" all of our PCs from Win2K to XP, but as I remember earlier versions of PyMOL 0.98 betas were not compatible with SP2 ..

Re: [PyMOL] PyMOL versus WinXP, SP2

2005-05-06 Thread Pinotsis
Hi Tom, I was running for two months pymol beta versions (because of my new graphics card) and since yesterday the v0.98 without any problem at all. I am working on win XP sp2 installed. Cheers Nikos *** Nikos Pinotsis, PhD EMBL-Hamburg, c/o DESY Notkestr. 85,

RE: [PyMOL] PyMOL versus WinXP, SP2

2005-05-06 Thread Warren DeLano
Tom, FYI: The Toshiba laptop I cart everywhere I go is Win XP Service Pack 2 with an nVidia GeForce4 460 Go graphics chip. No problems whatsoever. I can't recall for sure, but I think that there may have been some confusion between XP SP2 and the problems seen with the nVidia drivers. As far

RE: [PyMOL] PyMOL versus WinXP, SP2

2005-05-06 Thread Peter Teriete
I have v0.98 running on my laptop [1] featuring XP pro with SP2 installed and haven't noticed any problems so far. [1] Systemax, Intel Pentium M (Centrino) 1.6 with an onboard graphics card. Hope that helps. Peter -- Dr Peter Teriete Laboratory of Molecular Biophysics University of Oxford

RE: [PyMOL] PyMOL versus WinXP, SP2

2005-05-06 Thread Thomas Stout
Thanks all for the positive feedback regarding XP SP2sounds like my earlier experiences with SP2 may have been due to "complicating factors" :} -Tom -Original Message- From: Pinotsis [mailto:pinot...@embl-hamburg.de] Sent: Friday, May 06, 2005 8:37 AM To: Thomas Stout Cc: pymol-user

Re: [PyMOL] gradient color scheme in pymol

2005-05-06 Thread Charles Moad
set_color salmon, [1.0, 0.8, 0.8] color salmon, all Bingding Huang wrote: > > Another question, > Is it possible to use RGB color in pymol like > > color [0,128,255], resn CYS > ? > I tried it but it failed in pymol! > > > Thanks? > >> Is there any gradient color scheme in pymol? >> i.e, diff