Hi Warren,
I noticed that if I build residues at the N-terminus of a
protein, the protein is reoriented to give a best fit to
the new residue. I think it's more natural to have the
newly added residues reoriented to fit the original
protein, as happens when adding to the C-terminus. To add
r
Hi Sarma,
> I can change the color of the surface to gray or a rainbow gradient
> using the options but can't find a way to specify the residues that need
> to be colored differently in a surface representation.
You most likely need to select the residues first. That will give you an
extra entr
Have you tried the "select resi" function? This allows you to specify the
identification numbers of the amino-acids you want to select (and color).
Have a look here for the complete description:
http://pymol.sourceforge.net/newman/user/S0220commands.html
Regards,
Grégori Gerebtzoff
Division of B
Hi List
How can I set, by line commands, cmyk colour and maximum quality display
to ray?
Also, would be very nice if pymol could show in a feedback log file ou
screen the commands being executed when triggered by mouse on
graphical menu. It would help a lot automatising scripts.
Thanks in advanc
Sarma,
I am trying to create a surface representation of a protein with
mutations that abolish activity in one color (say yellow) and the ones
that don't change activity in another (say green). The rest of the
residues colored gray.
I can change the color of the surface to gray or a rainbow gr
> How can I set, by line commands, cmyk colour
space cmyk
> and maximum quality display
util.performance(0)
> Also, would be very nice if pymol could show in a feedback
> log file ou screen the commands being executed when triggered
> by mouse on graphical menu. It would help a lot automatisi
