[PyMOL] Electronic density maps

2004-06-21 Thread Konrad Hinsen
I am trying to visualize electronic densities that I prepare in my own code. This means that I have to write them in XPlor format in order to load them into PyMOL. Is there anywhere a detailed description of that format, preferably with some example files? The best I could find is a summary.

RE: [PyMOL] Electronic density maps

2004-06-21 Thread Warren DeLano
Konrad, There are several options for loading map data into PyMOL now: XPLOR (format=xplor) CCP4 (format=ccpy) O/BRIX (format=brix) In addition, you can use the following non-crystallographic formats: Delphi/Grasp PHI files (format=phi) AVS FLD files (as output from MEAD) (format=fld) and in

[PyMOL] ray-trace stop button?

2004-06-21 Thread Mark Wilke
Is there any way of stopping a ray trace once it has been started without closing pymol? Some of my ray trace jobs take too long and I want to stop them. I've also noticed that pymol doesn't close very elegently during a ray trace job. I'm working on a windows pc and the "end task" approach some