All-
When using the Pymol ability
to save a structure as a PDB file it appears that the "standard" PDB
format is changed in at least one instance. When a sidechain has more
than one conformation in the crystal structure (A, B), the saved PDB
file will have the two conformations before the
Eric,
For now,
set retain_order, on
Before writing out your PDB file -- that will insure that nothing changes.
I'll look into whether the default behavior can be changed before the next
release...
Cheers,
Warren
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