[PyMOL] save molecule format

2004-02-13 Thread Eric Zollars
All-     When using the Pymol ability to save a structure as a PDB file it appears that the "standard" PDB format is changed in at least one instance.  When a sidechain has more than one conformation in the crystal structure (A, B), the saved PDB file will have the two conformations before the

RE: [PyMOL] save molecule format

2004-02-13 Thread Warren DeLano
Eric, For now, set retain_order, on Before writing out your PDB file -- that will insure that nothing changes. I'll look into whether the default behavior can be changed before the next release... Cheers, Warren > -Original Message- > From: pymol-users-ad...@lists.sourceforg