Just to repeat the subject, it appears that pymol takes no account of
the SCALE records in a PDB file.
The built in assumptions of the orientation of the unit cell therefore
gives an erroneous relationship between the unit cell and the atomic
co-ordinates. The attached file demonstrates the probl
Keith,
Thank you for bringing this issue to my attention.
I can confirm that PyMOL doesn't currently read SCALE records. In order
to generate correct crystal symmetry, it requires the input PDB coordinates to
be properly oriented and translated with respect to the crystal latti