Re: [PyMOL] volume representation is extremely dark colored

2020-05-27 Thread Stanevich, Vitali [JRDUS] via PyMOL-users
eforge.net Subject: [EXTERNAL] Re: [PyMOL] volume representation is extremely dark colored Hi Vitali, Try this: set precomputed_lighting Or upgrade to the latest PyMOL version which has this setting by default. It's an Intel Graphics driver issue, you can read about it in this bu

Re: [PyMOL] volume representation is extremely dark colored

2020-05-26 Thread Akbar Shaikh
Can you try: set precomputed_lighting, 1 set use_shaders, 0 *Akbar Shaikh* | Associate Scientist II *P:* +91 9767217767 [image: Schrodinger Logo] Science and Technology Support On Wed, May 27, 2020 at 8:11 AM Stanevich,

Re: [PyMOL] volume representation is extremely dark colored

2020-05-26 Thread Thomas Holder
Hi Vitali, Try this: set precomputed_lighting Or upgrade to the latest PyMOL version which has this setting by default. It's an Intel Graphics driver issue, you can read about it in this bug report: https://github.com/schrodinger/pymol-open-source/issues/15 Cheers, Thomas > On May 27, 20

Re: [PyMOL] volume representation is extremely dark colored

2020-05-26 Thread Stanevich, Vitali [JRDUS] via PyMOL-users
Hi Blaine, Setting ambient to 0.1 didn't change anything. Setting to 0.4 and higher improves brightness but makes representation not very "esthetically pleasing" - the color is definitively oversaturated. Thanks, Vitali -Original Message- From: Mooers, Blaine H.M. (HSC) Sent: Tuesda

Re: [PyMOL] volume representation is extremely dark colored

2020-05-26 Thread Mooers, Blaine H.M. (HSC)
Hi Vitali, Maybe ambient was set to a large negative value. Doing so has not impact on line drawings. Try resetting it to the default value. set ambient, 0.1 Best regards, Blaine Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology College of Medicine Uni