Re: [PyMOL] spheres representation and atomic / ionic radii

2006-07-03 Thread Grégori Gerebtzoff
even add these "new" definitions in your pymolrc file. Hope it helped! Cheers, Greg -Original Message- From: Michael Weber [mailto:web...@mailer.uni-marburg.de] Sent: samedi, 1. juillet 2006 20:02 To: Grégori Gerebtzoff Subject: Re: [PyMOL] spheres representation and atomic /

Re: [PyMOL] spheres representation and atomic / ionic radii

2006-07-01 Thread Grégori Gerebtzoff
Dear Michael, I do not agree with you; I never observed any variation between sphere representation and experimental data. But to test the accuracy of the sphere size, I did the following sequence: 1) I created a molecule composed of one hydrogen and one oxygen, with a "fake" distance of 1.52 A

Re: [PyMOL] spheres representation and atomic / ionic radii

2006-06-30 Thread Tsjerk Wassenaar
Hi Michael, The answer to the second question is: yes alter selection,vdw=1.0 will change the radius of selected atoms to 1.0 angstrom. Cheers, Tsjerk On 6/30/06, Michael Weber wrote: Hi, I have a question concerning the "spheres" representation. According to my rough estimation the sphere