Re: [PyMOL] ray - volume

2011-11-29 Thread Jason Vertrees
Hi David, > Since I happen to be playing with volumes right now, I tried that and > it causes my sticks to pop out of the volumes (see attached).  This is > on a build of the latest open source code in SVN. You have found the reason why this isn't turned on by default. There are still some proble

Re: [PyMOL] ray - volume

2011-11-29 Thread lina
On Wed, Nov 30, 2011 at 12:25 AM, Jason Vertrees wrote: > Hi David, > > Are your data and color ramp points correct? If you send me the data, > I can double-check what we've done. I am also confusing how to put the quasi-center of volume on some certain atom. Even I only chose one atom, but the

Re: [PyMOL] ray - volume

2011-11-29 Thread Jason Vertrees
Hi David, Are your data and color ramp points correct? If you send me the data, I can double-check what we've done. Cheers, -- Jason On Tue, Nov 29, 2011 at 10:56 AM, David Hall wrote: > Since I happen to be playing with volumes right now, I tried that and > it causes my sticks to pop out of t

Re: [PyMOL] ray - volume

2011-11-29 Thread lina
On Tue, Nov 29, 2011 at 11:56 PM, David Hall wrote: > Since I happen to be playing with volumes right now, I tried that and > it causes my sticks to pop out of the volumes (see attached).  This is > on a build of the latest open source code in SVN. Thanks for confirmation. There are some unmet d

Re: [PyMOL] ray - volume

2011-11-29 Thread lina
On Tue, Nov 29, 2011 at 11:34 PM, Jason Vertrees wrote: > Hi Lina, > > set ray_volume, on Thanks, is the ray_volume some new feature in latest version? seems Version 1.4. no ray_volume feature. Best regards, > > Cheers, > > -- Jason > > On Tue, Nov 29, 2011 at 10:27 AM, lina wrote: >> Hi, >> >

Re: [PyMOL] ray - volume

2011-11-29 Thread Jason Vertrees
Hi Lina, set ray_volume, on Cheers, -- Jason On Tue, Nov 29, 2011 at 10:27 AM, lina wrote: > Hi, > > a quick question, how to keep the volume during ray. > > the volume is here, > > but after ray, > > it's gone, > > what's kinda of special settings I need to take care? > > Thanks with best reg