In my first e-mail I made a mistake a protonated His is a charged His.
Thanks to the guidance of Jason I found that the more convenient way to
solve my problem was modifying the file
"/usr/lib/python2.7/dist-packages/pymol/editor.py", inside that file there
is dictionary, relating the names of the
Thanks for the tip!
On Fri, Oct 11, 2013 at 8:53 AM, Jason Vertrees <
jason.vertr...@schrodinger.com> wrote:
> Osvaldo,
>
> To make PyMOL pick fragments from another location just edit the path
> at the top of pymol/modules/chempy/fragments/__init__.py.
>
> The fab command is in pymol/modules/py
Osvaldo,
To make PyMOL pick fragments from another location just edit the path
at the top of pymol/modules/chempy/fragments/__init__.py.
The fab command is in pymol/modules/pymol/editor.py.
Cheers,
-- Jason
On Thu, Oct 10, 2013 at 11:38 PM, Osvaldo Martin wrote:
> BTW, there is an easy opti
BTW, there is an easy option to make cmd.fab() to pick the fragments from
an alternative location? (just to avoid modifying the original fragments
files)
thanks,
Osvaldo.
On Fri, Oct 11, 2013 at 12:32 AM, Osvaldo Martin wrote:
> Ok, I will try editing those files.
>
> Cheers,
>
> Osvaldo.
>
>
>
Ok, I will try editing those files.
Cheers,
Osvaldo.
On Fri, Oct 11, 2013 at 12:12 AM, Jason Vertrees <
jason.vertr...@schrodinger.com> wrote:
> Hi Osvaldo,
>
> This isn't built in yet. But, if you need to do that, you can edit the
> Python picked files found here:
>
> pymol/data/chempy/fragme
Hi Osvaldo,
This isn't built in yet. But, if you need to do that, you can edit the
Python picked files found here:
pymol/data/chempy/fragments
Cheers
-- Jason
On Thu, Oct 10, 2013 at 2:41 PM, Osvaldo Martin wrote:
>
> I am using the comand cmd.fab() to create small peptides. There is an easy