Re: [PyMOL] ligand superimpose (multiple structures) and RMSD value

2015-02-09 Thread Lukáš Pravda
- webchem.ncbr.muni.cz/Platform/MotiveQuery/Index If you would have further questions, just let me know. Lukas From: Folmer Fredslund [mailto:folm...@gmail.com] Sent: Monday, February 9, 2015 4:21 PM To: Lukáš Pravda Subject: Re: [PyMOL] ligand superimpose (multiple structures) and

Re: [PyMOL] ligand superimpose (multiple structures) and RMSD value

2015-02-09 Thread Lukáš Pravda
HI Abdul, Not sure if this is the solution you would like to, but there are several tools which are tailored specifically for this purpose (i.e. superimposition of small molecules). One of them is SiteBinder (http://webchem.ncbr.muni.cz/Platform/App/SiteBinder), it allows you to do variety