Re: [PyMOL] how to get an atom coordinates information -- feature request

2016-03-03 Thread Schubert, Carsten [JRDUS]
older [mailto:thomas.hol...@schrodinger.com] Sent: Thursday, February 25, 2016 1:58 PM To: Albert; Schubert, Carsten [JRDUS] Cc: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] how to get an atom coordinates information Hi Carsten & Albert, There actually is a function for getting the coordin

Re: [PyMOL] how to get an atom coordinates information

2016-02-25 Thread Thomas Holder
Hi Carsten & Albert, There actually is a function for getting the coordinates of a single atom. Example: PyMOL>print cmd.get_atom_coords('first (elem O)') Cheers, Thomas On 25 Feb 2016, at 09:54, Schubert, Carsten [JRDUS] wrote: > Albert, > > there is no command line tool for that purpos

Re: [PyMOL] how to get an atom coordinates information

2016-02-25 Thread Schubert, Carsten [JRDUS]
Albert, there is no command line tool for that purpose per se, however you can use the iterate command for that purpose. http://pymolwiki.org/index.php/Iterate#Example:_Get_coordinates There are other ways to do this but this will get you going more quickly. -Original Message- From: A