Thanks, Jason, it works. :)
Li
On Sun, Sep 12, 2010 at 5:40 PM, Jason Vertrees <
jason.vertr...@schrodinger.com> wrote:
> Hi Li,
>
> I created a small python script "testAlign.py" with the following 3
> lines as its content:
>
> cmd.fetch("1cll 1ggz", async=0)
> rmsd = cmd.align("1cll", "1ggz")[
Hi Li,
I created a small python script "testAlign.py" with the following 3
lines as its content:
cmd.fetch("1cll 1ggz", async=0)
rmsd = cmd.align("1cll", "1ggz")[0]
print "RSMD for aligning 1cll to 1ggz is: ", rmsd
This fetches two PDBs, aligns them and reports their RMSD. Now, just
run "pymol
