Re: [PyMOL] change cartoon transparency for only a selection

2011-12-02 Thread Jason Vertrees
Hi Kristoffer, The key is to set "cartoon skip" on the cartoon to hide: #fetch a protein and make a copy fetch 1cll, async=0 create a_copy, 1cll # show them as cartoons set cartoon_transparency, 0.75, a_copy show_as cartoon # select the region of interest select to_hide, i. 103-111 orient

Re: [PyMOL] change cartoon transparency for only a selection

2011-12-01 Thread Jason Vertrees
Hi Kristoffer, Cartoon transparency is an object-level property. You can use this trick though: http://pymolwiki.org/index.php/Cartoon#Various_Transparency_Levels. Cheers, -- Jason On Thu, Dec 1, 2011 at 10:34 AM, essolini wrote: > Greetings! > > I have a problem with Pymol driving me crazy,